Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
P04214 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
P04214 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
P04214 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
P04214 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
P04214 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 Gm28659-201ENSMUST00000188013 759 ntBASIC18.4■□□□□ 0.54
P04214 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.4■□□□□ 0.54
P04214 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.4■□□□□ 0.54
P04214 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
P04214 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P04214 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.39■□□□□ 0.54
P04214 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.39■□□□□ 0.54
P04214 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
P04214 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
P04214 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
P04214 Gm15794-201ENSMUST00000120182 631 ntBASIC18.39■□□□□ 0.53
P04214 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P04214 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.39■□□□□ 0.53
P04214 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04214 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
P04214 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.39■□□□□ 0.53
P04214 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04214 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
P04214 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
P04214 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.39■□□□□ 0.53
P04214 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.38■□□□□ 0.53
P04214 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
P04214 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.38■□□□□ 0.53
P04214 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
P04214 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
P04214 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P04214 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04214 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.37■□□□□ 0.53
P04214 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
P04214 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.37■□□□□ 0.53
P04214 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04214 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04214 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04214 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.37■□□□□ 0.53
P04214 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.37■□□□□ 0.53
P04214 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04214 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04214 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P04214 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.36■□□□□ 0.53
P04214 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.36■□□□□ 0.53
P04214 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
P04214 Gm27459-201ENSMUST00000184860 107 ntBASIC18.36■□□□□ 0.53
P04214 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.36■□□□□ 0.53
P04214 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 Gm5864-201ENSMUST00000202263 970 ntBASIC18.36■□□□□ 0.53
P04214 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
P04214 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
P04214 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
P04214 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Notumos-201ENSMUST00000151998 2659 ntBASIC18.35■□□□□ 0.53
P04214 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P04214 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
P04214 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.34■□□□□ 0.53
P04214 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04214 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04214 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04214 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P04214 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.34■□□□□ 0.53
P04214 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P04214 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04214 Gm5867-201ENSMUST00000063197 592 ntBASIC18.34■□□□□ 0.53
P04214 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
P04214 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms