Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04212 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P04212 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04212 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
P04212 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P04212 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
P04212 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.22□□□□□ -0.13
P04212 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.22□□□□□ -0.13
P04212 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
P04212 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.22□□□□□ -0.13
P04212 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04212 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
P04212 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Gm2399-201ENSMUST00000104944 225 ntBASIC14.21□□□□□ -0.13
P04212 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
P04212 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.21□□□□□ -0.13
P04212 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.21□□□□□ -0.13
P04212 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04212 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04212 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
P04212 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04212 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
P04212 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04212 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.2□□□□□ -0.14
P04212 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.2□□□□□ -0.14
P04212 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.2□□□□□ -0.14
P04212 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.2□□□□□ -0.14
P04212 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.2□□□□□ -0.14
P04212 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.2□□□□□ -0.14
P04212 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.2□□□□□ -0.14
P04212 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
P04212 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04212 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
P04212 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04212 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.19□□□□□ -0.14
P04212 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
P04212 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms