Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Col4a1P02463 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.66■■□□□ 1.06
Col4a1P02463 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.66■■□□□ 1.06
Col4a1P02463 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col4a1P02463 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col4a1P02463 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col4a1P02463 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col4a1P02463 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col4a1P02463 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.65■■□□□ 1.06
Col4a1P02463 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Col4a1P02463 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.65■■□□□ 1.06
Col4a1P02463 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Col4a1P02463 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.64■■□□□ 1.05
Col4a1P02463 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Col4a1P02463 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col4a1P02463 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col4a1P02463 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.63■■□□□ 1.05
Col4a1P02463 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.63■■□□□ 1.05
Col4a1P02463 Gm27357-201ENSMUST00000183754 135 ntBASIC21.63■■□□□ 1.05
Col4a1P02463 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col4a1P02463 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col4a1P02463 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Col4a1P02463 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Col4a1P02463 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col4a1P02463 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Col4a1P02463 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Col4a1P02463 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Col4a1P02463 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.62■■□□□ 1.05
Col4a1P02463 Gm11355-201ENSMUST00000121120 306 ntBASIC21.62■■□□□ 1.05
Col4a1P02463 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.62■■□□□ 1.05
Col4a1P02463 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.62■■□□□ 1.05
Col4a1P02463 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.62■■□□□ 1.05
Col4a1P02463 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Col4a1P02463 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col4a1P02463 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col4a1P02463 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col4a1P02463 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Gm26039-201ENSMUST00000158152 144 ntBASIC21.61■■□□□ 1.05
Col4a1P02463 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.61■■□□□ 1.05
Col4a1P02463 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Gm18669-201ENSMUST00000216049 778 ntBASIC21.61■■□□□ 1.05
Col4a1P02463 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col4a1P02463 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.6■■□□□ 1.05
Col4a1P02463 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Gm7461-201ENSMUST00000058918 827 ntBASIC21.6■■□□□ 1.05
Col4a1P02463 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col4a1P02463 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.59■■□□□ 1.05
Col4a1P02463 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.59■■□□□ 1.05
Col4a1P02463 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.59■■□□□ 1.05
Col4a1P02463 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Col4a1P02463 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Col4a1P02463 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Col4a1P02463 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col4a1P02463 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col4a1P02463 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Col4a1P02463 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col4a1P02463 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Col4a1P02463 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Col4a1P02463 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.58■■□□□ 1.04
Col4a1P02463 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Col4a1P02463 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a1P02463 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a1P02463 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.57■■□□□ 1.04
Col4a1P02463 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Col4a1P02463 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a1P02463 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a1P02463 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a1P02463 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col4a1P02463 Olfr129-201ENSMUST00000122318 993 ntBASIC21.56■■□□□ 1.04
Col4a1P02463 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col4a1P02463 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms