Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
P01800 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P01800 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
P01800 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P01800 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.35■□□□□ 0.05
P01800 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
P01800 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
P01800 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.35■□□□□ 0.05
P01800 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.35■□□□□ 0.05
P01800 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.35■□□□□ 0.05
P01800 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
P01800 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.35■□□□□ 0.05
P01800 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.35■□□□□ 0.05
P01800 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P01800 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
P01800 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Gm7290-201ENSMUST00000104990 617 ntBASIC15.34■□□□□ 0.05
P01800 Gm12918-201ENSMUST00000120234 636 ntBASIC15.34■□□□□ 0.05
P01800 Gm15710-201ENSMUST00000121821 636 ntBASIC15.34■□□□□ 0.05
P01800 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.34■□□□□ 0.05
P01800 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Gm5075-201ENSMUST00000196916 622 ntBASIC15.34■□□□□ 0.05
P01800 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.34■□□□□ 0.05
P01800 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.34■□□□□ 0.05
P01800 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.34■□□□□ 0.05
P01800 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.34■□□□□ 0.05
P01800 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
P01800 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
P01800 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
P01800 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P01800 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
P01800 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
P01800 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
P01800 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
P01800 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
P01800 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
P01800 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.33■□□□□ 0.04
P01800 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.33■□□□□ 0.04
P01800 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
P01800 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P01800 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.32■□□□□ 0.04
P01800 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
P01800 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
P01800 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.32■□□□□ 0.04
P01800 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.32■□□□□ 0.04
P01800 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.32■□□□□ 0.04
P01800 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
P01800 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.32■□□□□ 0.04
P01800 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P01800 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
P01800 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.32■□□□□ 0.04
P01800 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
P01800 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms