Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ifna1P01572 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ifna1P01572 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.82□□□□□ -0.04
Ifna1P01572 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.82□□□□□ -0.04
Ifna1P01572 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.82□□□□□ -0.04
Ifna1P01572 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ifna1P01572 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ifna1P01572 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ifna1P01572 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ifna1P01572 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ifna1P01572 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ifna1P01572 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ifna1P01572 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ifna1P01572 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ifna1P01572 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.81□□□□□ -0.04
Ifna1P01572 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Ifna1P01572 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ifna1P01572 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.8□□□□□ -0.04
Ifna1P01572 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ifna1P01572 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ifna1P01572 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.8□□□□□ -0.04
Ifna1P01572 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.8□□□□□ -0.04
Ifna1P01572 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.8□□□□□ -0.04
Ifna1P01572 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ifna1P01572 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ifna1P01572 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ifna1P01572 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ifna1P01572 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ifna1P01572 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.79□□□□□ -0.04
Ifna1P01572 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ifna1P01572 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.79□□□□□ -0.04
Ifna1P01572 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.79□□□□□ -0.04
Ifna1P01572 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.79□□□□□ -0.04
Ifna1P01572 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ifna1P01572 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ifna1P01572 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.78□□□□□ -0.04
Ifna1P01572 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.78□□□□□ -0.04
Ifna1P01572 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.78□□□□□ -0.04
Ifna1P01572 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ifna1P01572 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ifna1P01572 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ifna1P01572 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Ifna1P01572 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.77□□□□□ -0.04
Ifna1P01572 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.77□□□□□ -0.04
Ifna1P01572 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ifna1P01572 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms