Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Cops3O88543 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cops3O88543 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cops3O88543 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cops3O88543 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cops3O88543 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cops3O88543 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cops3O88543 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.69■□□□□ 0.1
Cops3O88543 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.69■□□□□ 0.1
Cops3O88543 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.69■□□□□ 0.1
Cops3O88543 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.69■□□□□ 0.1
Cops3O88543 Gm42642-201ENSMUST00000200683 355 ntBASIC15.69■□□□□ 0.1
Cops3O88543 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Cops3O88543 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.69■□□□□ 0.1
Cops3O88543 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.69■□□□□ 0.1
Cops3O88543 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cops3O88543 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cops3O88543 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.68■□□□□ 0.1
Cops3O88543 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Cops3O88543 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cops3O88543 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.67■□□□□ 0.1
Cops3O88543 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.67■□□□□ 0.1
Cops3O88543 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.67■□□□□ 0.1
Cops3O88543 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cops3O88543 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 AV356131-201ENSMUST00000206201 750 ntBASIC15.67■□□□□ 0.1
Cops3O88543 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.67■□□□□ 0.1
Cops3O88543 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.67■□□□□ 0.1
Cops3O88543 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Cops3O88543 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cops3O88543 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cops3O88543 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Cops3O88543 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.66■□□□□ 0.1
Cops3O88543 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.66■□□□□ 0.1
Cops3O88543 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.66■□□□□ 0.1
Cops3O88543 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cops3O88543 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.66■□□□□ 0.1
Cops3O88543 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops3O88543 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cops3O88543 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms