Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cacna1hO88427 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cacna1hO88427 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cacna1hO88427 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.1■□□□□ 0.33
Cacna1hO88427 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1hO88427 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1hO88427 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.1■□□□□ 0.33
Cacna1hO88427 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cacna1hO88427 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1hO88427 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1hO88427 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1hO88427 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1hO88427 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.1■□□□□ 0.33
Cacna1hO88427 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.1■□□□□ 0.33
Cacna1hO88427 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1hO88427 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cacna1hO88427 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cacna1hO88427 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cacna1hO88427 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cacna1hO88427 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.09■□□□□ 0.33
Cacna1hO88427 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.09■□□□□ 0.33
Cacna1hO88427 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1hO88427 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1hO88427 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1hO88427 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cacna1hO88427 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Cacna1hO88427 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1hO88427 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1hO88427 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cacna1hO88427 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1hO88427 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1hO88427 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1hO88427 Gm37025-201ENSMUST00000195159 829 ntBASIC17.08■□□□□ 0.33
Cacna1hO88427 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cacna1hO88427 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1hO88427 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1hO88427 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.08■□□□□ 0.32
Cacna1hO88427 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1hO88427 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.08■□□□□ 0.32
Cacna1hO88427 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1hO88427 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1hO88427 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.08■□□□□ 0.32
Cacna1hO88427 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1hO88427 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1hO88427 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Cacna1hO88427 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cacna1hO88427 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.07■□□□□ 0.32
Cacna1hO88427 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.07■□□□□ 0.32
Cacna1hO88427 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.07■□□□□ 0.32
Cacna1hO88427 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cacna1hO88427 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.07■□□□□ 0.32
Cacna1hO88427 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cacna1hO88427 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.07■□□□□ 0.32
Cacna1hO88427 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cacna1hO88427 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.07■□□□□ 0.32
Cacna1hO88427 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cacna1hO88427 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cacna1hO88427 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cacna1hO88427 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.06■□□□□ 0.32
Cacna1hO88427 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Gm14494-201ENSMUST00000118786 435 ntBASIC17.06■□□□□ 0.32
Cacna1hO88427 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.06■□□□□ 0.32
Cacna1hO88427 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cacna1hO88427 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.06■□□□□ 0.32
Cacna1hO88427 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1hO88427 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1hO88427 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1hO88427 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.05■□□□□ 0.32
Cacna1hO88427 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.05■□□□□ 0.32
Cacna1hO88427 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1hO88427 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cacna1hO88427 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1hO88427 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1hO88427 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1hO88427 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.05■□□□□ 0.32
Cacna1hO88427 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms