Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Col5a1O88207 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Col5a1O88207 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Col5a1O88207 Gm27389-201ENSMUST00000183622 195 ntBASIC15.85■□□□□ 0.13
Col5a1O88207 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.85■□□□□ 0.13
Col5a1O88207 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col5a1O88207 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col5a1O88207 Gm28659-201ENSMUST00000188013 759 ntBASIC15.84■□□□□ 0.13
Col5a1O88207 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col5a1O88207 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col5a1O88207 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col5a1O88207 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col5a1O88207 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col5a1O88207 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col5a1O88207 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col5a1O88207 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col5a1O88207 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col5a1O88207 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.84■□□□□ 0.13
Col5a1O88207 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col5a1O88207 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.84■□□□□ 0.13
Col5a1O88207 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col5a1O88207 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col5a1O88207 Idnk-204ENSMUST00000226010 1898 ntBASIC15.83■□□□□ 0.13
Col5a1O88207 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.83■□□□□ 0.13
Col5a1O88207 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col5a1O88207 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col5a1O88207 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col5a1O88207 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.83■□□□□ 0.12
Col5a1O88207 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.83■□□□□ 0.12
Col5a1O88207 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.83■□□□□ 0.12
Col5a1O88207 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col5a1O88207 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col5a1O88207 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col5a1O88207 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Gm13884-201ENSMUST00000118103 829 ntBASIC15.82■□□□□ 0.12
Col5a1O88207 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.82■□□□□ 0.12
Col5a1O88207 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col5a1O88207 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.82■□□□□ 0.12
Col5a1O88207 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col5a1O88207 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.82■□□□□ 0.12
Col5a1O88207 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col5a1O88207 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.82■□□□□ 0.12
Col5a1O88207 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Col5a1O88207 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col5a1O88207 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col5a1O88207 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.82■□□□□ 0.12
Col5a1O88207 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col5a1O88207 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.81■□□□□ 0.12
Col5a1O88207 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.81■□□□□ 0.12
Col5a1O88207 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Mir8112-201ENSMUST00000184382 131 ntBASIC15.81■□□□□ 0.12
Col5a1O88207 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.81■□□□□ 0.12
Col5a1O88207 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col5a1O88207 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a1O88207 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a1O88207 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a1O88207 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.8■□□□□ 0.12
Col5a1O88207 Gm27525-201ENSMUST00000184465 107 ntBASIC15.8■□□□□ 0.12
Col5a1O88207 Gm37935-201ENSMUST00000192012 982 ntBASIC15.8■□□□□ 0.12
Col5a1O88207 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.8■□□□□ 0.12
Col5a1O88207 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a1O88207 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Col5a1O88207 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms