Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip1O70479 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tnfaip1O70479 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Tnfaip1O70479 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.5■□□□□ 0.55
Tnfaip1O70479 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnfaip1O70479 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.49■□□□□ 0.55
Tnfaip1O70479 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Gm7461-201ENSMUST00000058918 827 ntBASIC18.49■□□□□ 0.55
Tnfaip1O70479 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnfaip1O70479 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.48■□□□□ 0.55
Tnfaip1O70479 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnfaip1O70479 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Gm18958-201ENSMUST00000174258 762 ntBASIC18.47■□□□□ 0.55
Tnfaip1O70479 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.47■□□□□ 0.55
Tnfaip1O70479 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnfaip1O70479 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.46■□□□□ 0.55
Tnfaip1O70479 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Mir3081-201ENSMUST00000175305 84 ntBASIC18.46■□□□□ 0.55
Tnfaip1O70479 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.46■□□□□ 0.55
Tnfaip1O70479 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tnfaip1O70479 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tnfaip1O70479 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.45■□□□□ 0.54
Tnfaip1O70479 Gm6623-201ENSMUST00000173570 544 ntBASIC18.45■□□□□ 0.54
Tnfaip1O70479 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tnfaip1O70479 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip1O70479 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tnfaip1O70479 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Tnfaip1O70479 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip1O70479 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.44■□□□□ 0.54
Tnfaip1O70479 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms