Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pdlim1O70400 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.29■□□□□ 0.36
Pdlim1O70400 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.29■□□□□ 0.36
Pdlim1O70400 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pdlim1O70400 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pdlim1O70400 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim1O70400 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim1O70400 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.28■□□□□ 0.36
Pdlim1O70400 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.28■□□□□ 0.36
Pdlim1O70400 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.28■□□□□ 0.36
Pdlim1O70400 Timm23-208ENSMUST00000226683 750 ntBASIC17.28■□□□□ 0.36
Pdlim1O70400 Odf3b-204ENSMUST00000227834 930 ntBASIC17.28■□□□□ 0.36
Pdlim1O70400 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pdlim1O70400 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pdlim1O70400 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pdlim1O70400 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Pdlim1O70400 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pdlim1O70400 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim1O70400 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.27■□□□□ 0.36
Pdlim1O70400 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim1O70400 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim1O70400 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim1O70400 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pdlim1O70400 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim1O70400 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim1O70400 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pdlim1O70400 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim1O70400 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pdlim1O70400 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim1O70400 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim1O70400 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim1O70400 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim1O70400 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim1O70400 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pdlim1O70400 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim1O70400 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim1O70400 Gm24841-201ENSMUST00000158676 357 ntBASIC17.26■□□□□ 0.35
Pdlim1O70400 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.26■□□□□ 0.35
Pdlim1O70400 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.26■□□□□ 0.35
Pdlim1O70400 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.26■□□□□ 0.35
Pdlim1O70400 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Pdlim1O70400 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.26■□□□□ 0.35
Pdlim1O70400 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.26■□□□□ 0.35
Pdlim1O70400 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pdlim1O70400 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pdlim1O70400 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pdlim1O70400 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.25■□□□□ 0.35
Pdlim1O70400 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.25■□□□□ 0.35
Pdlim1O70400 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pdlim1O70400 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms