Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Mir2861-201ENSMUST00000175539 82 ntBASIC18.55■□□□□ 0.56
Pja1O55176 Gm44549-201ENSMUST00000208351 577 ntBASIC18.55■□□□□ 0.56
Pja1O55176 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pja1O55176 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pja1O55176 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pja1O55176 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pja1O55176 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.54■□□□□ 0.56
Pja1O55176 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.54■□□□□ 0.56
Pja1O55176 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pja1O55176 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pja1O55176 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pja1O55176 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Pja1O55176 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.53■□□□□ 0.56
Pja1O55176 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pja1O55176 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pja1O55176 Gm10418-201ENSMUST00000100943 576 ntBASIC18.53■□□□□ 0.56
Pja1O55176 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pja1O55176 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
Pja1O55176 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Gm26571-201ENSMUST00000181399 666 ntBASIC18.53■□□□□ 0.56
Pja1O55176 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pja1O55176 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pja1O55176 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pja1O55176 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pja1O55176 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.52■□□□□ 0.56
Pja1O55176 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.52■□□□□ 0.56
Pja1O55176 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pja1O55176 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pja1O55176 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pja1O55176 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
Pja1O55176 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pja1O55176 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pja1O55176 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pja1O55176 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.52■□□□□ 0.56
Pja1O55176 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pja1O55176 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pja1O55176 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pja1O55176 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pja1O55176 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pja1O55176 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pja1O55176 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pja1O55176 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pja1O55176 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.52■□□□□ 0.55
Pja1O55176 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pja1O55176 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pja1O55176 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pja1O55176 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Gm26524-201ENSMUST00000192339 390 ntBASIC18.51■□□□□ 0.55
Pja1O55176 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pja1O55176 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pja1O55176 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pja1O55176 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pja1O55176 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pja1O55176 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.5■□□□□ 0.55
Pja1O55176 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pja1O55176 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pja1O55176 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms