Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gm15375-201ENSMUST00000119510 849 ntBASIC18.69■□□□□ 0.58
Kcnu1O54982 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Mir6349-201ENSMUST00000184059 97 ntBASIC18.69■□□□□ 0.58
Kcnu1O54982 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Kcnu1O54982 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Kcnu1O54982 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Kcnu1O54982 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
Kcnu1O54982 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.68■□□□□ 0.58
Kcnu1O54982 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Kcnu1O54982 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.67■□□□□ 0.58
Kcnu1O54982 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.67■□□□□ 0.58
Kcnu1O54982 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.67■□□□□ 0.58
Kcnu1O54982 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Kcnu1O54982 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Kcnu1O54982 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Kcnu1O54982 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Kcnu1O54982 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.66■□□□□ 0.58
Kcnu1O54982 Gm20049-201ENSMUST00000219950 730 ntBASIC18.66■□□□□ 0.58
Kcnu1O54982 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Kcnu1O54982 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.66■□□□□ 0.58
Kcnu1O54982 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Kcnu1O54982 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Kcnu1O54982 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Kcnu1O54982 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Kcnu1O54982 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Kcnu1O54982 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.65■□□□□ 0.58
Kcnu1O54982 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Kcnu1O54982 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Kcnu1O54982 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Kcnu1O54982 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Kcnu1O54982 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Kcnu1O54982 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Kcnu1O54982 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Kcnu1O54982 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Kcnu1O54982 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Kcnu1O54982 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Kcnu1O54982 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Kcnu1O54982 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Kcnu1O54982 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Kcnu1O54982 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Kcnu1O54982 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Kcnu1O54982 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.64■□□□□ 0.57
Kcnu1O54982 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Kcnu1O54982 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Kcnu1O54982 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Kcnu1O54982 Gm11643-201ENSMUST00000119578 864 ntBASIC18.63■□□□□ 0.57
Kcnu1O54982 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.63■□□□□ 0.57
Kcnu1O54982 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Kcnu1O54982 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms