Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.85■□□□□ 0.45
Banf1O54962 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.85■□□□□ 0.45
Banf1O54962 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.85■□□□□ 0.45
Banf1O54962 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Banf1O54962 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Banf1O54962 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Banf1O54962 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.84■□□□□ 0.45
Banf1O54962 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Banf1O54962 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Banf1O54962 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Banf1O54962 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Banf1O54962 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Banf1O54962 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Banf1O54962 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.83■□□□□ 0.45
Banf1O54962 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Banf1O54962 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Banf1O54962 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Banf1O54962 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Banf1O54962 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.83■□□□□ 0.44
Banf1O54962 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Banf1O54962 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.83■□□□□ 0.44
Banf1O54962 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.83■□□□□ 0.44
Banf1O54962 Gm29791-202ENSMUST00000207888 369 ntBASIC17.83■□□□□ 0.44
Banf1O54962 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.83■□□□□ 0.44
Banf1O54962 Zfp783-201ENSMUST00000095946 670 ntBASIC17.83■□□□□ 0.44
Banf1O54962 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Banf1O54962 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Banf1O54962 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Banf1O54962 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Banf1O54962 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Banf1O54962 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Banf1O54962 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Gm7290-201ENSMUST00000104990 617 ntBASIC17.82■□□□□ 0.44
Banf1O54962 Gm12918-201ENSMUST00000120234 636 ntBASIC17.82■□□□□ 0.44
Banf1O54962 Gm15710-201ENSMUST00000121821 636 ntBASIC17.82■□□□□ 0.44
Banf1O54962 Gm5075-201ENSMUST00000196916 622 ntBASIC17.82■□□□□ 0.44
Banf1O54962 Gm44549-201ENSMUST00000208351 577 ntBASIC17.82■□□□□ 0.44
Banf1O54962 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Banf1O54962 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.82■□□□□ 0.44
Banf1O54962 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.82■□□□□ 0.44
Banf1O54962 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Banf1O54962 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Banf1O54962 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Banf1O54962 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.81■□□□□ 0.44
Banf1O54962 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Banf1O54962 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Banf1O54962 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Banf1O54962 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Banf1O54962 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.81■□□□□ 0.44
Banf1O54962 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Banf1O54962 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Banf1O54962 Gm26524-201ENSMUST00000192339 390 ntBASIC17.81■□□□□ 0.44
Banf1O54962 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Banf1O54962 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Banf1O54962 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Banf1O54962 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Banf1O54962 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Banf1O54962 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Banf1O54962 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.8■□□□□ 0.44
Banf1O54962 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Banf1O54962 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Banf1O54962 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.8■□□□□ 0.44
Banf1O54962 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Banf1O54962 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Banf1O54962 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Banf1O54962 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Banf1O54962 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Banf1O54962 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms