Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChkaO54804 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ChkaO54804 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.72■□□□□ 0.43
ChkaO54804 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.72■□□□□ 0.43
ChkaO54804 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ChkaO54804 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ChkaO54804 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChkaO54804 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ChkaO54804 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ChkaO54804 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ChkaO54804 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ChkaO54804 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.71■□□□□ 0.43
ChkaO54804 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Gm13401-201ENSMUST00000117074 291 ntBASIC17.71■□□□□ 0.43
ChkaO54804 Gm12933-201ENSMUST00000120203 872 ntBASIC17.71■□□□□ 0.43
ChkaO54804 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.71■□□□□ 0.43
ChkaO54804 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.71■□□□□ 0.43
ChkaO54804 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ChkaO54804 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ChkaO54804 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
ChkaO54804 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.71■□□□□ 0.42
ChkaO54804 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ChkaO54804 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
ChkaO54804 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ChkaO54804 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ChkaO54804 Gm5408-201ENSMUST00000197998 747 ntBASIC17.69■□□□□ 0.42
ChkaO54804 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ChkaO54804 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
ChkaO54804 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.68■□□□□ 0.42
ChkaO54804 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.68■□□□□ 0.42
ChkaO54804 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.68■□□□□ 0.42
ChkaO54804 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.68■□□□□ 0.42
ChkaO54804 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ChkaO54804 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.68■□□□□ 0.42
ChkaO54804 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.67■□□□□ 0.42
ChkaO54804 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ChkaO54804 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ChkaO54804 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ChkaO54804 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.67■□□□□ 0.42
ChkaO54804 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ChkaO54804 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.67■□□□□ 0.42
ChkaO54804 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ChkaO54804 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ChkaO54804 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ChkaO54804 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms