Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.81■□□□□ 0.44
Limk2O54785 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.8■□□□□ 0.44
Limk2O54785 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Mir8112-201ENSMUST00000184382 131 ntBASIC17.8■□□□□ 0.44
Limk2O54785 Gm37292-201ENSMUST00000192062 758 ntBASIC17.8■□□□□ 0.44
Limk2O54785 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.8■□□□□ 0.44
Limk2O54785 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Limk2O54785 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Limk2O54785 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Limk2O54785 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Limk2O54785 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.79■□□□□ 0.44
Limk2O54785 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Limk2O54785 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.79■□□□□ 0.44
Limk2O54785 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.79■□□□□ 0.44
Limk2O54785 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Limk2O54785 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.79■□□□□ 0.44
Limk2O54785 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Limk2O54785 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.78■□□□□ 0.44
Limk2O54785 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.78■□□□□ 0.44
Limk2O54785 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Gm43799-201ENSMUST00000201845 579 ntBASIC17.78■□□□□ 0.44
Limk2O54785 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.78■□□□□ 0.44
Limk2O54785 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Limk2O54785 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Limk2O54785 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Limk2O54785 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.77■□□□□ 0.44
Limk2O54785 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Limk2O54785 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.77■□□□□ 0.44
Limk2O54785 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.77■□□□□ 0.44
Limk2O54785 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.77■□□□□ 0.44
Limk2O54785 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.77■□□□□ 0.44
Limk2O54785 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Limk2O54785 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Limk2O54785 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.77■□□□□ 0.43
Limk2O54785 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Limk2O54785 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Limk2O54785 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Limk2O54785 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Limk2O54785 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Limk2O54785 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Limk2O54785 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Limk2O54785 Gm12382-201ENSMUST00000122005 922 ntBASIC17.76■□□□□ 0.43
Limk2O54785 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.76■□□□□ 0.43
Limk2O54785 Gm10231-201ENSMUST00000181584 441 ntBASIC17.76■□□□□ 0.43
Limk2O54785 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Gm43183-201ENSMUST00000200632 547 ntBASIC17.76■□□□□ 0.43
Limk2O54785 Gm10175-202ENSMUST00000208752 441 ntBASIC17.76■□□□□ 0.43
Limk2O54785 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.76■□□□□ 0.43
Limk2O54785 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Limk2O54785 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Limk2O54785 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms