Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Npc1O35604 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.09■□□□□ 0.33
Npc1O35604 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.09■□□□□ 0.33
Npc1O35604 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.09■□□□□ 0.33
Npc1O35604 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.09■□□□□ 0.33
Npc1O35604 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Npc1O35604 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.09■□□□□ 0.33
Npc1O35604 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Npc1O35604 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Npc1O35604 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Npc1O35604 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.08■□□□□ 0.33
Npc1O35604 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Npc1O35604 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.08■□□□□ 0.32
Npc1O35604 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.08■□□□□ 0.32
Npc1O35604 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.08■□□□□ 0.32
Npc1O35604 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Npc1O35604 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.07■□□□□ 0.32
Npc1O35604 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.07■□□□□ 0.32
Npc1O35604 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Npc1O35604 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Npc1O35604 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.07■□□□□ 0.32
Npc1O35604 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Npc1O35604 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.06■□□□□ 0.32
Npc1O35604 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.06■□□□□ 0.32
Npc1O35604 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.06■□□□□ 0.32
Npc1O35604 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.06■□□□□ 0.32
Npc1O35604 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Npc1O35604 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Npc1O35604 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Npc1O35604 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.06■□□□□ 0.32
Npc1O35604 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Npc1O35604 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Npc1O35604 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Npc1O35604 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Npc1O35604 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Npc1O35604 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Npc1O35604 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Npc1O35604 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Npc1O35604 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Npc1O35604 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Npc1O35604 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Npc1O35604 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms