Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Clk2O35491 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clk2O35491 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.09■□□□□ 0.65
Clk2O35491 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clk2O35491 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clk2O35491 Gm2274-201ENSMUST00000184539 609 ntBASIC19.09■□□□□ 0.65
Clk2O35491 Gm37025-201ENSMUST00000195159 829 ntBASIC19.09■□□□□ 0.65
Clk2O35491 Gm45058-201ENSMUST00000205810 766 ntBASIC19.09■□□□□ 0.65
Clk2O35491 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clk2O35491 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clk2O35491 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Clk2O35491 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clk2O35491 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clk2O35491 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Clk2O35491 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clk2O35491 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clk2O35491 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clk2O35491 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clk2O35491 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clk2O35491 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.08■□□□□ 0.64
Clk2O35491 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Clk2O35491 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clk2O35491 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clk2O35491 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clk2O35491 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.08■□□□□ 0.64
Clk2O35491 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clk2O35491 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Clk2O35491 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clk2O35491 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clk2O35491 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk2O35491 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.07■□□□□ 0.64
Clk2O35491 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.07■□□□□ 0.64
Clk2O35491 Gm9731-201ENSMUST00000209480 747 ntBASIC19.07■□□□□ 0.64
Clk2O35491 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.07■□□□□ 0.64
Clk2O35491 Il3ra-202ENSMUST00000223589 738 ntBASIC19.07■□□□□ 0.64
Clk2O35491 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk2O35491 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk2O35491 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk2O35491 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk2O35491 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clk2O35491 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.06■□□□□ 0.64
Clk2O35491 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Clk2O35491 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Clk2O35491 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk2O35491 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk2O35491 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk2O35491 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk2O35491 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk2O35491 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Clk2O35491 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk2O35491 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.05■□□□□ 0.64
Clk2O35491 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk2O35491 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.05■□□□□ 0.64
Clk2O35491 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk2O35491 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk2O35491 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Clk2O35491 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.04■□□□□ 0.64
Clk2O35491 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Grk6-206ENSMUST00000224995 2971 ntBASIC19.04■□□□□ 0.64
Clk2O35491 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.04■□□□□ 0.64
Clk2O35491 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk2O35491 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.03■□□□□ 0.64
Clk2O35491 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clk2O35491 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clk2O35491 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Gm17661-201ENSMUST00000170317 270 ntBASIC19.03■□□□□ 0.64
Clk2O35491 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Mir5130-201ENSMUST00000175160 84 ntBASIC19.03■□□□□ 0.64
Clk2O35491 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk2O35491 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms