Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Gm10418-201ENSMUST00000100943 576 ntBASIC16.45■□□□□ 0.22
Cx3cl1O35188 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.45■□□□□ 0.22
Cx3cl1O35188 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.45■□□□□ 0.22
Cx3cl1O35188 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cx3cl1O35188 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.44■□□□□ 0.22
Cx3cl1O35188 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.44■□□□□ 0.22
Cx3cl1O35188 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cx3cl1O35188 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cx3cl1O35188 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.43■□□□□ 0.22
Cx3cl1O35188 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Gm12382-201ENSMUST00000122005 922 ntBASIC16.43■□□□□ 0.22
Cx3cl1O35188 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.43■□□□□ 0.22
Cx3cl1O35188 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cx3cl1O35188 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.42■□□□□ 0.22
Cx3cl1O35188 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Gm29791-202ENSMUST00000207888 369 ntBASIC16.42■□□□□ 0.22
Cx3cl1O35188 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.42■□□□□ 0.22
Cx3cl1O35188 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cx3cl1O35188 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cx3cl1O35188 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms