Protein–RNA interactions for Protein: O08992

Sdcbp, Syntenin-1, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SdcbpO08992 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SdcbpO08992 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SdcbpO08992 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.77□□□□□ -0.05
SdcbpO08992 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
SdcbpO08992 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SdcbpO08992 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.77□□□□□ -0.05
SdcbpO08992 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SdcbpO08992 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SdcbpO08992 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SdcbpO08992 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.76□□□□□ -0.05
SdcbpO08992 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.76□□□□□ -0.05
SdcbpO08992 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.76□□□□□ -0.05
SdcbpO08992 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SdcbpO08992 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SdcbpO08992 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SdcbpO08992 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.75□□□□□ -0.05
SdcbpO08992 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SdcbpO08992 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SdcbpO08992 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Gm12896-201ENSMUST00000118430 226 ntBASIC14.74□□□□□ -0.05
SdcbpO08992 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.74□□□□□ -0.05
SdcbpO08992 Gm8969-201ENSMUST00000199694 526 ntBASIC14.74□□□□□ -0.05
SdcbpO08992 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SdcbpO08992 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.74□□□□□ -0.05
SdcbpO08992 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SdcbpO08992 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.73□□□□□ -0.05
SdcbpO08992 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.73□□□□□ -0.05
SdcbpO08992 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.73□□□□□ -0.05
SdcbpO08992 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SdcbpO08992 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.73□□□□□ -0.05
SdcbpO08992 Gm29791-202ENSMUST00000207888 369 ntBASIC14.73□□□□□ -0.05
SdcbpO08992 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Mtag2-201ENSMUST00000058665 714 ntBASIC14.73□□□□□ -0.05
SdcbpO08992 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SdcbpO08992 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SdcbpO08992 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms