Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hps1O08983 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hps1O08983 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Hps1O08983 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hps1O08983 Gm12527-201ENSMUST00000117967 564 ntBASIC16.27■□□□□ 0.2
Hps1O08983 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hps1O08983 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hps1O08983 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.27■□□□□ 0.2
Hps1O08983 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hps1O08983 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Hps1O08983 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hps1O08983 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hps1O08983 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.27■□□□□ 0.19
Hps1O08983 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Hps1O08983 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hps1O08983 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hps1O08983 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.26■□□□□ 0.19
Hps1O08983 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.26■□□□□ 0.19
Hps1O08983 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hps1O08983 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hps1O08983 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.26■□□□□ 0.19
Hps1O08983 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hps1O08983 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Hps1O08983 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hps1O08983 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.25■□□□□ 0.19
Hps1O08983 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.25■□□□□ 0.19
Hps1O08983 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.25■□□□□ 0.19
Hps1O08983 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hps1O08983 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Hps1O08983 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hps1O08983 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hps1O08983 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.24■□□□□ 0.19
Hps1O08983 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.24■□□□□ 0.19
Hps1O08983 Gm6365-201ENSMUST00000054711 744 ntBASIC16.24■□□□□ 0.19
Hps1O08983 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.24■□□□□ 0.19
Hps1O08983 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Hps1O08983 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Hps1O08983 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hps1O08983 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Hps1O08983 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Hps1O08983 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hps1O08983 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hps1O08983 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hps1O08983 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hps1O08983 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.22■□□□□ 0.19
Hps1O08983 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.22■□□□□ 0.19
Hps1O08983 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.22■□□□□ 0.19
Hps1O08983 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.22■□□□□ 0.19
Hps1O08983 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hps1O08983 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms