Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Ercc2O08811 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.94■□□□□ 0.46
Ercc2O08811 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Gm22240-201ENSMUST00000175225 82 ntBASIC17.94■□□□□ 0.46
Ercc2O08811 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Ercc2O08811 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ercc2O08811 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ercc2O08811 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc2O08811 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc2O08811 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc2O08811 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ercc2O08811 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc2O08811 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Ercc2O08811 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc2O08811 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc2O08811 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.93■□□□□ 0.46
Ercc2O08811 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Ercc2O08811 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.93■□□□□ 0.46
Ercc2O08811 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ercc2O08811 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ercc2O08811 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc2O08811 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.93■□□□□ 0.46
Ercc2O08811 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.93■□□□□ 0.46
Ercc2O08811 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ercc2O08811 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.92■□□□□ 0.46
Ercc2O08811 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.92■□□□□ 0.46
Ercc2O08811 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ercc2O08811 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ercc2O08811 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.92■□□□□ 0.46
Ercc2O08811 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.92■□□□□ 0.46
Ercc2O08811 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ercc2O08811 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.92■□□□□ 0.46
Ercc2O08811 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ercc2O08811 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.91■□□□□ 0.46
Ercc2O08811 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ercc2O08811 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ercc2O08811 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ercc2O08811 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.9■□□□□ 0.46
Ercc2O08811 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.9■□□□□ 0.46
Ercc2O08811 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ercc2O08811 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ercc2O08811 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ercc2O08811 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ercc2O08811 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ercc2O08811 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.89■□□□□ 0.45
Ercc2O08811 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Gm10517-202ENSMUST00000192970 758 ntBASIC17.89■□□□□ 0.45
Ercc2O08811 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ercc2O08811 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ercc2O08811 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ercc2O08811 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ercc2O08811 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms