Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.84■□□□□ 0.29
Polr2jO08740 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Polr2jO08740 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Polr2jO08740 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Polr2jO08740 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Polr2jO08740 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Polr2jO08740 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Polr2jO08740 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.83■□□□□ 0.29
Polr2jO08740 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Polr2jO08740 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Polr2jO08740 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Polr2jO08740 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Polr2jO08740 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Polr2jO08740 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Polr2jO08740 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Polr2jO08740 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Polr2jO08740 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Polr2jO08740 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Polr2jO08740 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.82■□□□□ 0.28
Polr2jO08740 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Polr2jO08740 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.82■□□□□ 0.28
Polr2jO08740 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Gm38285-201ENSMUST00000192928 922 ntBASIC16.82■□□□□ 0.28
Polr2jO08740 Gm42642-201ENSMUST00000200683 355 ntBASIC16.82■□□□□ 0.28
Polr2jO08740 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.82■□□□□ 0.28
Polr2jO08740 Gm29791-202ENSMUST00000207888 369 ntBASIC16.82■□□□□ 0.28
Polr2jO08740 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.82■□□□□ 0.28
Polr2jO08740 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Polr2jO08740 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Polr2jO08740 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Polr2jO08740 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Polr2jO08740 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.81■□□□□ 0.28
Polr2jO08740 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.81■□□□□ 0.28
Polr2jO08740 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.81■□□□□ 0.28
Polr2jO08740 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.81■□□□□ 0.28
Polr2jO08740 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Polr2jO08740 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Polr2jO08740 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Polr2jO08740 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Polr2jO08740 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Polr2jO08740 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Polr2jO08740 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.8■□□□□ 0.28
Polr2jO08740 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
Polr2jO08740 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.8■□□□□ 0.28
Polr2jO08740 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Polr2jO08740 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Polr2jO08740 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Polr2jO08740 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.8■□□□□ 0.28
Polr2jO08740 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Polr2jO08740 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.8■□□□□ 0.28
Polr2jO08740 Gm6365-201ENSMUST00000054711 744 ntBASIC16.8■□□□□ 0.28
Polr2jO08740 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Polr2jO08740 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Polr2jO08740 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Polr2jO08740 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.79■□□□□ 0.28
Polr2jO08740 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.79■□□□□ 0.28
Polr2jO08740 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.79■□□□□ 0.28
Polr2jO08740 Mir8112-201ENSMUST00000184382 131 ntBASIC16.79■□□□□ 0.28
Polr2jO08740 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Polr2jO08740 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.79■□□□□ 0.28
Polr2jO08740 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms