Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 Gm37856-201ENSMUST00000191634 999 ntBASIC15.55■□□□□ 0.08
Raet1bO08603 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Raet1bO08603 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Raet1bO08603 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.55■□□□□ 0.08
Raet1bO08603 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Raet1bO08603 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Raet1bO08603 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Gm11643-201ENSMUST00000119578 864 ntBASIC15.54■□□□□ 0.08
Raet1bO08603 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Trmt13-210ENSMUST00000198454 880 ntBASIC15.54■□□□□ 0.08
Raet1bO08603 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Raet1bO08603 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Raet1bO08603 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Raet1bO08603 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.53■□□□□ 0.08
Raet1bO08603 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Mir8112-201ENSMUST00000184382 131 ntBASIC15.53■□□□□ 0.08
Raet1bO08603 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.53■□□□□ 0.08
Raet1bO08603 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Raet1bO08603 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Raet1bO08603 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Raet1bO08603 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.52■□□□□ 0.08
Raet1bO08603 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Raet1bO08603 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.52■□□□□ 0.08
Raet1bO08603 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Raet1bO08603 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Raet1bO08603 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.52■□□□□ 0.08
Raet1bO08603 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Raet1bO08603 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Raet1bO08603 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1bO08603 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1bO08603 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1bO08603 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1bO08603 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1bO08603 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.52■□□□□ 0.07
Raet1bO08603 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1bO08603 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1bO08603 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Raet1bO08603 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Raet1bO08603 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Raet1bO08603 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.51■□□□□ 0.07
Raet1bO08603 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.51■□□□□ 0.07
Raet1bO08603 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.51■□□□□ 0.07
Raet1bO08603 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.51■□□□□ 0.07
Raet1bO08603 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Raet1bO08603 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1bO08603 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1bO08603 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.5■□□□□ 0.07
Raet1bO08603 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.5■□□□□ 0.07
Raet1bO08603 Gm18666-201ENSMUST00000190039 958 ntBASIC15.5■□□□□ 0.07
Raet1bO08603 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.5■□□□□ 0.07
Raet1bO08603 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1bO08603 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1bO08603 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1bO08603 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Raet1bO08603 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Raet1bO08603 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Raet1bO08603 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms