Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc180J3QNE4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc180J3QNE4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC32■■■□□ 2.71
Ccdc180J3QNE4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc180J3QNE4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc180J3QNE4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Ccdc180J3QNE4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC31.99■■■□□ 2.71
Ccdc180J3QNE4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC31.99■■■□□ 2.71
Ccdc180J3QNE4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc180J3QNE4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc180J3QNE4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc180J3QNE4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc180J3QNE4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc180J3QNE4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc180J3QNE4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc180J3QNE4 Dmtn-210ENSMUST00000228824 2377 ntBASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc180J3QNE4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Ccdc180J3QNE4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc180J3QNE4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc180J3QNE4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc180J3QNE4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Ccdc180J3QNE4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
Ccdc180J3QNE4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
Ccdc180J3QNE4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc180J3QNE4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC31.95■■■□□ 2.7
Ccdc180J3QNE4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Ccdc180J3QNE4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Ccdc180J3QNE4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Ccdc180J3QNE4 Gm19721-201ENSMUST00000195284 1764 ntBASIC31.94■■■□□ 2.7
Ccdc180J3QNE4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC31.94■■■□□ 2.7
Ccdc180J3QNE4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ccdc180J3QNE4 AC125350.1-201ENSMUST00000225115 903 ntBASIC31.94■■■□□ 2.7
Ccdc180J3QNE4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC31.94■■■□□ 2.7
Ccdc180J3QNE4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ccdc180J3QNE4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Gm43272-201ENSMUST00000200599 1584 ntBASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC31.93■■■□□ 2.7
Ccdc180J3QNE4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Idnk-204ENSMUST00000226010 1898 ntBASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Gm26039-201ENSMUST00000158152 144 ntBASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Gm34391-201ENSMUST00000203706 907 ntBASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc180J3QNE4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC31.91■■■□□ 2.7
Ccdc180J3QNE4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC31.91■■■□□ 2.7
Ccdc180J3QNE4 Gm38342-201ENSMUST00000195710 2980 ntBASIC31.91■■■□□ 2.7
Ccdc180J3QNE4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ccdc180J3QNE4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ccdc180J3QNE4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ccdc180J3QNE4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Ccdc180J3QNE4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Ccdc180J3QNE4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ccdc180J3QNE4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC31.9■■■□□ 2.7
Ccdc180J3QNE4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms