Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm6576-201ENSMUST00000169678 883 ntBASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13d-3J3QMG8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13d-3J3QMG8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13d-3J3QMG8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Gm37292-201ENSMUST00000192062 758 ntBASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13d-3J3QMG8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13d-3J3QMG8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms