Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-1G3UXB3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx1-1G3UXB3 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.95■□□□□ 0.79
Nkx1-1G3UXB3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.95■□□□□ 0.78
Nkx1-1G3UXB3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx1-1G3UXB3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx1-1G3UXB3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.94■□□□□ 0.78
Nkx1-1G3UXB3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx1-1G3UXB3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx1-1G3UXB3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.94■□□□□ 0.78
Nkx1-1G3UXB3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Nkx1-1G3UXB3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx1-1G3UXB3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx1-1G3UXB3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Gm13401-201ENSMUST00000117074 291 ntBASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Gm10060-201ENSMUST00000212002 111 ntBASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nkx1-1G3UXB3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Gm6296-201ENSMUST00000222599 943 ntBASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 AC139323.1-201ENSMUST00000223370 1040 ntBASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx1-1G3UXB3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Gm27321-201ENSMUST00000185021 205 ntBASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx1-1G3UXB3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Gm15372-201ENSMUST00000120729 834 ntBASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms