Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NpcdF8VQB8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.03■□□□□ 0.96
NpcdF8VQB8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.03■□□□□ 0.96
NpcdF8VQB8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
NpcdF8VQB8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.03■□□□□ 0.96
NpcdF8VQB8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NpcdF8VQB8 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.03■□□□□ 0.96
NpcdF8VQB8 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.03■□□□□ 0.96
NpcdF8VQB8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NpcdF8VQB8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NpcdF8VQB8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NpcdF8VQB8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.02■□□□□ 0.96
NpcdF8VQB8 Gm6623-201ENSMUST00000173570 544 ntBASIC21.02■□□□□ 0.96
NpcdF8VQB8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NpcdF8VQB8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.02■□□□□ 0.96
NpcdF8VQB8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.02■□□□□ 0.95
NpcdF8VQB8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NpcdF8VQB8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NpcdF8VQB8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Gm26039-201ENSMUST00000158152 144 ntBASIC21.01■□□□□ 0.95
NpcdF8VQB8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Gm27459-201ENSMUST00000184860 107 ntBASIC21.01■□□□□ 0.95
NpcdF8VQB8 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.01■□□□□ 0.95
NpcdF8VQB8 Il3ra-202ENSMUST00000223589 738 ntBASIC21.01■□□□□ 0.95
NpcdF8VQB8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NpcdF8VQB8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NpcdF8VQB8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NpcdF8VQB8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21■□□□□ 0.95
NpcdF8VQB8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
NpcdF8VQB8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NpcdF8VQB8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NpcdF8VQB8 Gm13884-201ENSMUST00000118103 829 ntBASIC21■□□□□ 0.95
NpcdF8VQB8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21■□□□□ 0.95
NpcdF8VQB8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NpcdF8VQB8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NpcdF8VQB8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21■□□□□ 0.95
NpcdF8VQB8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NpcdF8VQB8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21■□□□□ 0.95
NpcdF8VQB8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NpcdF8VQB8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.99■□□□□ 0.95
NpcdF8VQB8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Gm18733-201ENSMUST00000173950 856 ntBASIC20.99■□□□□ 0.95
NpcdF8VQB8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NpcdF8VQB8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NpcdF8VQB8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NpcdF8VQB8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NpcdF8VQB8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NpcdF8VQB8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NpcdF8VQB8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NpcdF8VQB8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NpcdF8VQB8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.98■□□□□ 0.95
NpcdF8VQB8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NpcdF8VQB8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.98■□□□□ 0.95
NpcdF8VQB8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.97■□□□□ 0.95
NpcdF8VQB8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.97■□□□□ 0.95
NpcdF8VQB8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms