Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.67■□□□□ 0.26
Colca2F8VPY8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Colca2F8VPY8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Colca2F8VPY8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.65■□□□□ 0.26
Colca2F8VPY8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Colca2F8VPY8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Colca2F8VPY8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Colca2F8VPY8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Colca2F8VPY8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Gm18733-201ENSMUST00000173950 856 ntBASIC16.63■□□□□ 0.25
Colca2F8VPY8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.63■□□□□ 0.25
Colca2F8VPY8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.63■□□□□ 0.25
Colca2F8VPY8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Colca2F8VPY8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Colca2F8VPY8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Colca2F8VPY8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Colca2F8VPY8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.61■□□□□ 0.25
Colca2F8VPY8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.61■□□□□ 0.25
Colca2F8VPY8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms