Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Rab3c-203ENSMUST00000224180 967 ntBASIC18■□□□□ 0.47
Pcdh9F8VPK8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh9F8VPK8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh9F8VPK8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh9F8VPK8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdh9F8VPK8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Gm11927-201ENSMUST00000118472 759 ntBASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh9F8VPK8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Gm5408-201ENSMUST00000197998 747 ntBASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh9F8VPK8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms