Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Gm16061-201ENSMUST00000122167 857 ntBASIC17.79■□□□□ 0.44
Ccdc149F6V035 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.79■□□□□ 0.44
Ccdc149F6V035 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc149F6V035 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Gm13474-201ENSMUST00000122466 815 ntBASIC17.78■□□□□ 0.44
Ccdc149F6V035 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Gm37025-201ENSMUST00000195159 829 ntBASIC17.78■□□□□ 0.44
Ccdc149F6V035 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.78■□□□□ 0.44
Ccdc149F6V035 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc149F6V035 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc149F6V035 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc149F6V035 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.77■□□□□ 0.44
Ccdc149F6V035 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc149F6V035 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc149F6V035 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.77■□□□□ 0.44
Ccdc149F6V035 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.77■□□□□ 0.44
Ccdc149F6V035 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.77■□□□□ 0.44
Ccdc149F6V035 Gm18101-201ENSMUST00000215769 548 ntBASIC17.77■□□□□ 0.44
Ccdc149F6V035 Gm7791-201ENSMUST00000219066 539 ntBASIC17.77■□□□□ 0.44
Ccdc149F6V035 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc149F6V035 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc149F6V035 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ccdc149F6V035 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc149F6V035 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc149F6V035 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.76■□□□□ 0.43
Ccdc149F6V035 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.76■□□□□ 0.43
Ccdc149F6V035 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc149F6V035 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc149F6V035 Golph3-205ENSMUST00000228671 2842 ntBASIC17.76■□□□□ 0.43
Ccdc149F6V035 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Gm23634-201ENSMUST00000175071 91 ntBASIC17.75■□□□□ 0.43
Ccdc149F6V035 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc149F6V035 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc149F6V035 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms