Protein–RNA interactions for Protein: E9QAA8

Gm4841, Interferon-gamma-inducible GTPase Ifgga3 protein, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4841E9QAA8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.2■□□□□ 0.66
Gm4841E9QAA8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm4841E9QAA8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Gm38027-201ENSMUST00000192315 235 ntBASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Grk6-206ENSMUST00000224995 2971 ntBASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm4841E9QAA8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4841E9QAA8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Gm43799-201ENSMUST00000201845 579 ntBASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.17■□□□□ 0.66
Gm4841E9QAA8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Gm24841-201ENSMUST00000158676 357 ntBASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm4841E9QAA8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gm4841E9QAA8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gm4841E9QAA8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Gm4841E9QAA8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm4841E9QAA8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gm4841E9QAA8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms