Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.13■□□□□ 0.97
Ube4aE9Q735 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Ube4aE9Q735 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube4aE9Q735 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ube4aE9Q735 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.12■□□□□ 0.97
Ube4aE9Q735 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube4aE9Q735 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ube4aE9Q735 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.11■□□□□ 0.97
Ube4aE9Q735 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.11■□□□□ 0.97
Ube4aE9Q735 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4aE9Q735 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4aE9Q735 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.11■□□□□ 0.97
Ube4aE9Q735 Gm5587-201ENSMUST00000206270 674 ntBASIC21.11■□□□□ 0.97
Ube4aE9Q735 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4aE9Q735 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4aE9Q735 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
Ube4aE9Q735 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4aE9Q735 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4aE9Q735 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ube4aE9Q735 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube4aE9Q735 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube4aE9Q735 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4aE9Q735 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Gm9013-201ENSMUST00000132939 882 ntBASIC21.09■□□□□ 0.97
Ube4aE9Q735 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.09■□□□□ 0.97
Ube4aE9Q735 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube4aE9Q735 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4aE9Q735 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4aE9Q735 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4aE9Q735 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4aE9Q735 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Ube4aE9Q735 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ube4aE9Q735 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Ube4aE9Q735 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.08■□□□□ 0.97
Ube4aE9Q735 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4aE9Q735 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube4aE9Q735 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ube4aE9Q735 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ube4aE9Q735 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube4aE9Q735 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ube4aE9Q735 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.06■□□□□ 0.96
Ube4aE9Q735 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube4aE9Q735 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.06■□□□□ 0.96
Ube4aE9Q735 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube4aE9Q735 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube4aE9Q735 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.06■□□□□ 0.96
Ube4aE9Q735 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4aE9Q735 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4aE9Q735 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4aE9Q735 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4aE9Q735 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ube4aE9Q735 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms