Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Herc1E9PZP8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Gm27628-201ENSMUST00000184911 107 ntBASIC9.9□□□□□ -0.82
Herc1E9PZP8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Gm43630-201ENSMUST00000201550 776 ntBASIC9.9□□□□□ -0.82
Herc1E9PZP8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 AC153794.1-201ENSMUST00000169148 126 ntBASIC9.9□□□□□ -0.82
Herc1E9PZP8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.9□□□□□ -0.82
Herc1E9PZP8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Herc1E9PZP8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Herc1E9PZP8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Herc1E9PZP8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Herc1E9PZP8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.9□□□□□ -0.83
Herc1E9PZP8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.9□□□□□ -0.83
Herc1E9PZP8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Herc1E9PZP8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Herc1E9PZP8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Gm25990-201ENSMUST00000102440 86 ntBASIC9.89□□□□□ -0.83
Herc1E9PZP8 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.89□□□□□ -0.83
Herc1E9PZP8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Herc1E9PZP8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm4974-201ENSMUST00000209974 875 ntBASIC9.88□□□□□ -0.83
Herc1E9PZP8 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.88□□□□□ -0.83
Herc1E9PZP8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Herc1E9PZP8 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.87□□□□□ -0.83
Herc1E9PZP8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Herc1E9PZP8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms