Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc78D3Z5T1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc78D3Z5T1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Gm13836-201ENSMUST00000121159 501 ntBASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Gm9987-201ENSMUST00000069768 567 ntBASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc78D3Z5T1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Idnk-204ENSMUST00000226010 1898 ntBASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Gm11539-201ENSMUST00000119837 557 ntBASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Gm13436-201ENSMUST00000120418 567 ntBASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc78D3Z5T1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc78D3Z5T1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc78D3Z5T1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc78D3Z5T1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccdc78D3Z5T1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc78D3Z5T1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms