Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hfm1D3Z4R1 Gm37374-201ENSMUST00000194954 1829 ntBASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hfm1D3Z4R1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hfm1D3Z4R1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
Hfm1D3Z4R1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Hfm1D3Z4R1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hfm1D3Z4R1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC24.63■■□□□ 1.53
Hfm1D3Z4R1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Hfm1D3Z4R1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Hfm1D3Z4R1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Hfm1D3Z4R1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Gm5712-201ENSMUST00000199748 1043 ntBASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Hfm1D3Z4R1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 AC125350.1-201ENSMUST00000225115 903 ntBASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
Hfm1D3Z4R1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC24.6■■□□□ 1.53
Hfm1D3Z4R1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hfm1D3Z4R1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hfm1D3Z4R1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hfm1D3Z4R1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Hfm1D3Z4R1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hfm1D3Z4R1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hfm1D3Z4R1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hfm1D3Z4R1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Gm5784-201ENSMUST00000179344 2478 ntBASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Hfm1D3Z4R1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Gm18733-201ENSMUST00000173950 856 ntBASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Hfm1D3Z4R1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hfm1D3Z4R1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms