Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Gm44549-201ENSMUST00000208351 577 ntBASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hist1h2aeC0HKE4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Flg-201ENSMUST00000050758 1488 ntBASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Gm8969-201ENSMUST00000199694 526 ntBASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hist1h2aeC0HKE4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hist1h2aeC0HKE4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Gm12933-201ENSMUST00000120203 872 ntBASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Gm38285-201ENSMUST00000192928 922 ntBASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Gm5408-201ENSMUST00000197998 747 ntBASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Rab3c-203ENSMUST00000224180 967 ntBASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hist1h2aeC0HKE4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Gm13148-201ENSMUST00000118892 745 ntBASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hist1h2aeC0HKE4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.02■□□□□ 0.16
Hist1h2aeC0HKE4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms