Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptchd4B9EKX1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Gm33142-201ENSMUST00000193913 867 ntBASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ptchd4B9EKX1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Gm17661-201ENSMUST00000170317 270 ntBASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptchd4B9EKX1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptchd4B9EKX1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ptchd4B9EKX1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ptchd4B9EKX1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Mir1668-201ENSMUST00000184114 107 ntBASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Mir8112-201ENSMUST00000184382 131 ntBASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptchd4B9EKX1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Gm21559-201ENSMUST00000220638 855 ntBASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Gm8587-201ENSMUST00000076538 843 ntBASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptchd4B9EKX1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms