Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syce3B5KM66 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syce3B5KM66 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syce3B5KM66 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syce3B5KM66 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Syce3B5KM66 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.12■□□□□ 0.81
Syce3B5KM66 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.12■□□□□ 0.81
Syce3B5KM66 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syce3B5KM66 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syce3B5KM66 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Syce3B5KM66 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Syce3B5KM66 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.11■□□□□ 0.81
Syce3B5KM66 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Syce3B5KM66 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
Syce3B5KM66 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Syce3B5KM66 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.11■□□□□ 0.81
Syce3B5KM66 Reep4-203ENSMUST00000226563 1444 ntBASIC20.1■□□□□ 0.81
Syce3B5KM66 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.1■□□□□ 0.81
Syce3B5KM66 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Syce3B5KM66 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Gm13241-201ENSMUST00000094493 780 ntBASIC20.1■□□□□ 0.81
Syce3B5KM66 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Syce3B5KM66 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Syce3B5KM66 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Syce3B5KM66 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.09■□□□□ 0.81
Syce3B5KM66 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.09■□□□□ 0.81
Syce3B5KM66 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Syce3B5KM66 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Syce3B5KM66 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syce3B5KM66 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syce3B5KM66 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syce3B5KM66 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syce3B5KM66 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Syce3B5KM66 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.08■□□□□ 0.81
Syce3B5KM66 Gm43017-201ENSMUST00000198296 752 ntBASIC20.08■□□□□ 0.81
Syce3B5KM66 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syce3B5KM66 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Syce3B5KM66 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Syce3B5KM66 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syce3B5KM66 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syce3B5KM66 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syce3B5KM66 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Syce3B5KM66 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.07■□□□□ 0.8
Syce3B5KM66 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.07■□□□□ 0.8
Syce3B5KM66 Gm9988-201ENSMUST00000069786 435 ntBASIC20.07■□□□□ 0.8
Syce3B5KM66 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Syce3B5KM66 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.07■□□□□ 0.8
Syce3B5KM66 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.07■□□□□ 0.8
Syce3B5KM66 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syce3B5KM66 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Syce3B5KM66 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syce3B5KM66 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms