Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sh2d4bA6X942 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.77■□□□□ 0.59
Sh2d4bA6X942 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh2d4bA6X942 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.76■□□□□ 0.59
Sh2d4bA6X942 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Gm18959-201ENSMUST00000208954 655 ntBASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.76■□□□□ 0.59
Sh2d4bA6X942 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Gm37292-201ENSMUST00000192062 758 ntBASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d4bA6X942 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Gm10013-201ENSMUST00000106074 672 ntBASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 AA414768-201ENSMUST00000121924 1257 ntBASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Gm12382-201ENSMUST00000122005 922 ntBASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Gm33142-201ENSMUST00000193913 867 ntBASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh2d4bA6X942 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sh2d4bA6X942 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.72■□□□□ 0.59
Sh2d4bA6X942 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh2d4bA6X942 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms