Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.27□□□□□ -0.29
Col6a5A6H584 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.27□□□□□ -0.29
Col6a5A6H584 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col6a5A6H584 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col6a5A6H584 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a5A6H584 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.27□□□□□ -0.29
Col6a5A6H584 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.26□□□□□ -0.29
Col6a5A6H584 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Gm27321-201ENSMUST00000185021 205 ntBASIC13.26□□□□□ -0.29
Col6a5A6H584 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.26□□□□□ -0.29
Col6a5A6H584 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Col6a5A6H584 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col6a5A6H584 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Gm6277-202ENSMUST00000224036 2779 ntBASIC13.26□□□□□ -0.29
Col6a5A6H584 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Col6a5A6H584 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a5A6H584 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a5A6H584 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col6a5A6H584 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.25□□□□□ -0.29
Col6a5A6H584 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a5A6H584 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a5A6H584 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a5A6H584 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC13.24□□□□□ -0.29
Col6a5A6H584 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col6a5A6H584 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col6a5A6H584 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 Gm24841-201ENSMUST00000158676 357 ntBASIC13.24□□□□□ -0.29
Col6a5A6H584 Gm9727-201ENSMUST00000161387 555 ntBASIC13.24□□□□□ -0.29
Col6a5A6H584 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.24□□□□□ -0.29
Col6a5A6H584 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.24□□□□□ -0.29
Col6a5A6H584 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a5A6H584 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col6a5A6H584 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.23□□□□□ -0.29
Col6a5A6H584 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Col6a5A6H584 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col6a5A6H584 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.23□□□□□ -0.29
Col6a5A6H584 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a5A6H584 Gm27867-201ENSMUST00000184778 125 ntBASIC13.23□□□□□ -0.29
Col6a5A6H584 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.23□□□□□ -0.29
Col6a5A6H584 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.23□□□□□ -0.29
Col6a5A6H584 Chchd1-203ENSMUST00000224633 557 ntBASIC13.23□□□□□ -0.29
Col6a5A6H584 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms