Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Ubr4A2AN08 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.3□□□□□ -0.92
Ubr4A2AN08 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Ubr4A2AN08 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Ubr4A2AN08 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ubr4A2AN08 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Ubr4A2AN08 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Ubr4A2AN08 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC9.29□□□□□ -0.92
Ubr4A2AN08 Gm9899-201ENSMUST00000065519 555 ntBASIC9.29□□□□□ -0.92
Ubr4A2AN08 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC9.29□□□□□ -0.92
Ubr4A2AN08 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Gm43630-201ENSMUST00000201550 776 ntBASIC9.29□□□□□ -0.92
Ubr4A2AN08 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.29□□□□□ -0.92
Ubr4A2AN08 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.29□□□□□ -0.92
Ubr4A2AN08 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ubr4A2AN08 Gm44872-201ENSMUST00000207864 420 ntBASIC9.29□□□□□ -0.92
Ubr4A2AN08 Gm37820-201ENSMUST00000194021 2147 ntBASIC9.28□□□□□ -0.92
Ubr4A2AN08 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Mir6977-201ENSMUST00000184960 64 ntBASIC9.28□□□□□ -0.92
Ubr4A2AN08 Ndufaf2-202ENSMUST00000223734 556 ntBASIC9.28□□□□□ -0.92
Ubr4A2AN08 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Gm44544-201ENSMUST00000207052 1844 ntBASIC9.28□□□□□ -0.92
Ubr4A2AN08 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Gm12644-201ENSMUST00000119935 606 ntBASIC9.28□□□□□ -0.92
Ubr4A2AN08 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ubr4A2AN08 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Ubr4A2AN08 Gm18187-201ENSMUST00000196476 984 ntBASIC9.27□□□□□ -0.92
Ubr4A2AN08 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Ubr4A2AN08 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Mir3113-201ENSMUST00000175478 76 ntBASIC9.27□□□□□ -0.93
Ubr4A2AN08 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Cmtm5-203ENSMUST00000227441 610 ntBASIC9.27□□□□□ -0.93
Ubr4A2AN08 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ubr4A2AN08 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms