Protein–RNA interactions for Protein: A2AJB9

Lcn6, LCN6 isoform alpha, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn6A2AJB9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lcn6A2AJB9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lcn6A2AJB9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lcn6A2AJB9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lcn6A2AJB9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Gm3375-201ENSMUST00000203929 796 ntBASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lcn6A2AJB9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Lcn6A2AJB9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Mir7071-201ENSMUST00000184847 69 ntBASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Grk6-206ENSMUST00000224995 2971 ntBASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lcn6A2AJB9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lcn6A2AJB9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lcn6A2AJB9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lcn6A2AJB9 Gm12085-201ENSMUST00000119263 940 ntBASIC18.19■□□□□ 0.5
Lcn6A2AJB9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Lcn6A2AJB9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lcn6A2AJB9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lcn6A2AJB9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lcn6A2AJB9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lcn6A2AJB9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Lcn6A2AJB9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Lcn6A2AJB9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lcn6A2AJB9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lcn6A2AJB9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lcn6A2AJB9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms