Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Gm22325-201ENSMUST00000158904 308 ntBASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pkd2l1A2A259 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pkd2l1A2A259 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.13■□□□□ 0.33
Pkd2l1A2A259 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.13■□□□□ 0.33
Pkd2l1A2A259 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pkd2l1A2A259 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Gm715-201ENSMUST00000117865 831 ntBASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Gm15378-201ENSMUST00000121894 207 ntBASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pkd2l1A2A259 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Gm13158-201ENSMUST00000122007 736 ntBASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pkd2l1A2A259 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.1■□□□□ 0.33
Pkd2l1A2A259 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pkd2l1A2A259 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.09■□□□□ 0.33
Pkd2l1A2A259 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms