Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm12918-201ENSMUST00000120234 636 ntBASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Gm15710-201ENSMUST00000121821 636 ntBASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Gm5075-201ENSMUST00000196916 622 ntBASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Zfp783-201ENSMUST00000095946 670 ntBASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav12-1A0N8R1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Gm7291-201ENSMUST00000199147 382 ntBASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-1A0N8R1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Gm5874-201ENSMUST00000096101 508 ntBASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-1A0N8R1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Trav12-1A0N8R1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-1A0N8R1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Gm6211-202ENSMUST00000167849 925 ntBASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Gm44549-201ENSMUST00000208351 577 ntBASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-1A0N8R1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms