Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Gm10418-201ENSMUST00000100943 576 ntBASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav12d-1A0N8R0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav12d-1A0N8R0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Gm7514-201ENSMUST00000209475 934 ntBASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Gm10493-201ENSMUST00000097270 612 ntBASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav12d-1A0N8R0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Haglr-201ENSMUST00000100000 2085 ntBASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Gm38285-201ENSMUST00000192928 922 ntBASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav12d-1A0N8R0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12d-1A0N8R0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12d-1A0N8R0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms