Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Gm13148-201ENSMUST00000118892 745 ntBASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc112A0AUP1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc112A0AUP1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc112A0AUP1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Mir2861-201ENSMUST00000175539 82 ntBASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc112A0AUP1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Rab3c-203ENSMUST00000224180 967 ntBASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc112A0AUP1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Ccdc112A0AUP1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Ccdc112A0AUP1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Ccdc112A0AUP1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Gm9954-202ENSMUST00000198686 4725 ntBASIC20■□□□□ 0.79
Ccdc112A0AUP1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms