Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trbv17A0A140T8P8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trbv17A0A140T8P8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trbv17A0A140T8P8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trbv17A0A140T8P8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trbv17A0A140T8P8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.46□□□□□ -0.26
Trbv17A0A140T8P8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trbv17A0A140T8P8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.44□□□□□ -0.26
Trbv17A0A140T8P8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trbv17A0A140T8P8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms