Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc194A0A140LIT1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc194A0A140LIT1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc194A0A140LIT1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Ccdc194A0A140LIT1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Gm10418-201ENSMUST00000100943 576 ntBASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Gm27405-201ENSMUST00000184201 112 ntBASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Zfp783-201ENSMUST00000095946 670 ntBASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc194A0A140LIT1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Gm29791-202ENSMUST00000207888 369 ntBASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.44■□□□□ 0.38
Ccdc194A0A140LIT1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Gm26524-201ENSMUST00000192339 390 ntBASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Rab3c-203ENSMUST00000224180 967 ntBASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc194A0A140LIT1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc194A0A140LIT1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms