Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lcmt1A0A0U1RNF2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lcmt1A0A0U1RNF2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lcmt1A0A0U1RNF2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lcmt1A0A0U1RNF2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lcmt1A0A0U1RNF2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lcmt1A0A0U1RNF2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Gm11249-201ENSMUST00000117071 859 ntBASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Gm13158-201ENSMUST00000122007 736 ntBASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Mir2861-201ENSMUST00000175539 82 ntBASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lcmt1A0A0U1RNF2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.42■□□□□ 0.7
Lcmt1A0A0U1RNF2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Lcmt1A0A0U1RNF2 Gm11643-201ENSMUST00000119578 864 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms