Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13n-4A0A0G2JG01 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13n-4A0A0G2JG01 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm13836-201ENSMUST00000121159 501 ntBASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Gm18666-201ENSMUST00000190039 958 ntBASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-4A0A0G2JG01 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trav13n-4A0A0G2JG01 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13n-4A0A0G2JG01 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13n-4A0A0G2JG01 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav13n-4A0A0G2JG01 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-4A0A0G2JG01 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Dio3-201ENSMUST00000097228 1449 ntBASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm44549-201ENSMUST00000208351 577 ntBASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-4A0A0G2JG01 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav13n-4A0A0G2JG01 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms